Category: Uncategorized

  • Microbiome | estimating sequencing depth

      Introduction Determining the optimal sequencing depth is a critical step in microbiome research, especially for studies involving 16S rRNA, ITS, and other marker genes. The depth required depends on factors such as the target gene region, sample complexity, study design, and bioinformatics strategy. While no universal threshold exists, numerous empirical and modeling-based studies provide…