Bioinformatics. Technical consultation.
for health · food · agriculture · environment
PhD-led advice in environmental microbiology, pathogen detection and antimicrobial resistance. We have worked with academic groups, government agencies, biotech companies and aquaculture operators.
01 Surveillance and monitoring design
Design a surveillance or monitoring programme that produces defensible results: what to sample, where, how often, which assay, and how to read a detection or a non-detection. Covers eDNA and microbial surveillance for pathogens, antimicrobial resistance and environmental health.
For: Agencies · aquaculture operators · utilities · academic groups
Workflow
- Define the question and the decision the data must support
- Sampling design: sites, replicates, frequency and controls
- Assay and marker selection: qPCR, ddPCR, metabarcoding or metagenomics
- Field and lab SOPs: collection, filtration, preservation, contamination control
- Data analysis plan and detection thresholds
- Reporting format for management, agencies or regulators
Report outputs
- Surveillance design document
- Sampling plan and field SOP
- Assay selection and validation plan
- Interpretation guide: detections, non-detections, false positives
- Reporting template
- Roll-out and review plan
02 Microbiology assessment
A scientist-led assessment of the microbial status and risk of a system: a pond, water source, treatment plant or facility. We review what is known, plan the testing, interpret pathogen, indicator and resistance results, and tell you what they mean for your operation.
For: Aquaculture operators · utilities · food and environmental teams · agencies
Workflow
- Scope the system and the risks of concern
- Review existing data, records and prior results
- Testing plan: pathogens, indicators, resistance genes, community profiling
- Interpret results against baselines and applicable guidance
- Risk characterisation and priorities
- Recommendations and a monitoring plan
Report outputs
- Assessment report with findings and risk ranking
- Pathogen and AMR interpretation summary
- Source-tracking or contamination analysis where relevant
- Recommended controls and monitoring plan
- Executive summary for non-specialists
03 Study and project design
Design the study before you spend on it: aims, experimental design, sampling, controls, sequencing depth and statistics, so the data can answer the question you are asking. We also review plans written by others.
For: Academic groups · biotech R&D · agencies
Workflow
- Clarify aims and hypotheses
- Experimental design, replication and controls
- Sampling strategy and metadata plan
- Method and platform choice, depth and power
- Analysis and statistics plan
- Pilot design and go/no-go criteria
Report outputs
- Study design document
- Sampling and metadata templates
- Statistical analysis plan
- Pilot plan with decision criteria
- Written review of an existing plan
04 Technical and scientific writing
Clear, accurate scientific writing from people who do the work: technical sections of grants and proposals, methods and reports, evidence reviews, SOPs and protocols. We support your authorship and do not replace it.
For: Academic groups · biotech · agencies · operators
Workflow
- Brief and audience: reviewers, regulators or the public
- Evidence gathering and literature review
- Outline agreed with you
- Drafting by a domain scientist
- Review cycle with your team
- Final edit, figures and references
Report outputs
- Grant and proposal technical sections
- Methods and results write-ups
- Technical reports and white papers
- Evidence and literature reviews
- SOPs and protocols
- Plain-language summaries
- Responses to reviewers
05 Independent expert review
A second opinion you can rely on: independent scientific review of results, methods, vendor claims or a project plan. Useful before an investment, a purchase, a submission or any decision that is hard to reverse.
For: Investors · operators · agencies · R&D leaders
Workflow
- Agree the question and the material to review
- Review of data, methods and claims
- Independent re-analysis where needed
- Findings and confidence rating
- Written opinion and discussion
Report outputs
- Written expert opinion
- Technical due-diligence summary
- Method and vendor scorecard
- Re-analysis check of reported results
- Briefing for decision-makers
06 R&D strategy and training
Decide where microbiome and molecular methods fit in your organisation, then build the in-house capability to use them. Includes tailored workshops built around your team's own data and questions.
For: R&D leaders · operators · investors · wet-lab teams
Workflow diagram: Workflow · technical consultation
Workflow
- Use-case discovery and scoping
- ROI and value assessment
- Method and vendor recommendation
- Roadmap and capability plan
- Tailored workshops and handover
Report outputs
- Strategic roadmap
- Value and ROI assessment
- Vendor and method recommendations
- Memo report and slide deck
- Custom workshop syllabus and materials
Who we work with
Academic, government, biotech and aquaculture teams.
Academic groups
Study design, methods and technical writing for grants and papers.
Government agencies
Surveillance design, assessments and independent technical review.
Biotech companies
Method and vendor assessment, due diligence and R&D strategy.
Aquaculture operators
Pathogen and resistance assessments, with early-warning monitoring.
Tell us what you are deciding.
Describe your project and a scientist will reply within two working days.
Browse the site
- Bioinformatics services: amplicon, shotgun metagenomics, genomics, transcriptomics, pipelines
- Technical consultation: study design, review, writing and strategy
- Nova Microbiome Lab: the platform
- Nova Omics Lab: genomics and transcriptomics workspace
- Nova Colony Counter: AI colony counting on a phone
- Custom AI and apps: bioinformatics, aquaculture and agriculture tools made to order
- Resources: articles, methods, sample reports
- About Nova Lifetech
- Talk to us